Allen Institute Cell Lineage Reconstruction DREAM Challenge

syn20692755

Created By Verena Chung vchung

Status: Closed
Support: syn52962740
Overview: syn20692755/wiki/595096
Timeline: syn20692755/wiki/624669
Objective: syn20692755/wiki/624671
Incentives: syn20692755/wiki/624670
Organizers: syn52962730
Description: syn20692755/wiki/624672
ConductRules: syn20692755/wiki/624693
Contributors: syn52962734
Instructions: syn20692755/wiki/624691
Announcements: syn20692755/wiki/597061
ChallengeType: Data to Model
Task_1.DataWiki: syn20692755/wiki/624677
Task_1.TaskType:
Task_2.DataWiki: syn20692755/wiki/624682
Task_2.TaskType:
Task_3.DataWiki: syn20692755/wiki/624686
Task_3.TaskType:
EligibilityRules: syn20692755/wiki/624692
Task_1.DataFolder: syn20948839
Task_1.Motivation:
Task_2.DataFolder: syn20927764
Task_2.Motivation:
Task_3.DataFolder: syn20974951
Task_3.Motivation:
Task_1.Description: syn20692755/wiki/624676
Task_1.Leaderboard: syn20692755/wiki/624680
Task_2.Description: syn20692755/wiki/624681
Task_2.Leaderboard: syn20692755/wiki/624685
Task_3.Description: syn20692755/wiki/624687
Task_3.Leaderboard: syn20692755/wiki/624689
Task_1.EvaluationWiki: syn20692755/wiki/624678
Task_1.SubmissionType: File
Task_1.SubmissionWiki: syn20692755/wiki/624679
Task_2.EvaluationWiki: syn20692755/wiki/624683
Task_2.SubmissionType: File
Task_2.SubmissionWiki: syn20692755/wiki/624684
Task_3.EvaluationWiki: syn20692755/wiki/624688
Task_3.SubmissionType: File
Task_3.SubmissionWiki: syn20692755/wiki/624690
Challenge Updates
Webinar recording
First Webinar Date
Training set for subchallenge 3 has been posted
Three quick questions :)
Standard evaluation code
Triplets Correct Accuracy w/ Duplicate Samples
Question about Data in Challenge One
Question:Deadline extension for a whole week?
subchallenge 1: exact format for submission file?
About leaderboad and submission deadlines
subchallenge 2: The depth of tips
Mismatch of taxa names in some training sets in subchallenge1
subchallenge1: ground truth accuracy?
Webinar Question 2: Scoring will be "RF or triplet". Does this mean two different versions for each subchallenges, two leaderboards?
Webinar Question 1: Where will we find the webinar recording?
subchallenge 1 : size of test
Unable to download data recursively
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