Sorry for multi-multi-post.
We want to know error logs.
Sincerely,
--
Sorry, but we were unable to process your submission to the Proteogenomics Subchallenge 2 Ovarian.
Please refer to the challenge instructions which can be found at https://www.synapse.org/#!Synapse:syn8228304/wiki/448381 and to the error message below:
submission name: syn11475061
submission ID: 9654458
Created by Yasuhiro Kambara kambarakun Thanks for reply! Dear Yasuhiro,
Here is the log:
```
/sc2_model_and_functions.py:21: RuntimeWarning: invalid value encountered in subtract
x_numer = x - x.min(axis=0)
/sc2_model_and_functions.py:22: RuntimeWarning: invalid value encountered in subtract
x_denom = xp.max(xp.hstack([(x.max(axis=0) - x.min(axis=0)), xp.array(xp.repeat(xp.finfo(float).eps, repeats=x.shape[1]).astype(xp.float32))]), axis=0)
Traceback (most recent call last):
File "/sc2_predict.py", line 49, in
xp_pro_to_cna = scale_feature_minus_one_to_one(xp.array(df_pro[df_pro.columns & df_cna.columns].iloc[:, 1:].values.T).astype(xp.float32))
File "/sc2_model_and_functions.py", line 27, in scale_feature_minus_one_to_one
return (scale_feature_zero_to_one(x) - 0.5) * 2
File "/sc2_model_and_functions.py", line 21, in scale_feature_zero_to_one
x_numer = x - x.min(axis=0)
File "/usr/local/lib/python3.5/dist-packages/numpy/core/_methods.py", line 29, in _amin
return umr_minimum(a, axis, None, out, keepdims)
ValueError: zero-size array to reduction operation minimum which has no identity```
Best,
Tom
Drop files to upload
[SC2 OVA] SCORED in ex lane, but INVALID in main lane. page is loading…