Hi..
I passed sc3 ovarian exp lane, but got a error message from main lane.
plz help me with any hint from log?
submission name: syn11045777
submission ID: 9653202
Thank you!
Created by sungsoo park deepimagine1 Thanks Andrew and Yuanfang. I will check the memory..
Yep that is a memory error. There are less samples in the express lanes to make it quicker to test on. that's an out of memory issue. are you using matrix multiplication? that means the final test set is way bigger than the round2, @andrewelamb can you confirm? I can't show you the whole log, but the relevant part:
Traceback (most recent call last):
File "test.py", line 438, in
DoTest(OVARIAN_DATA_TYPE)
File "test.py", line 359, in DoTest
weight_path=local_weight_path, phos_name=phos_name, phos_gene=phos_gene), do_genes)
File "/usr/lib/python2.7/multiprocessing/pool.py", line 251, in map
return self.map_async(func, iterable, chunksize).get()
File "/usr/lib/python2.7/multiprocessing/pool.py", line 567, in get
raise self._value
IOError: [Errno 12] Cannot allocate memory