We won’t provide the raw files for MS-based proteome and phosphoproteome on Synapse, however, you can download the raw data from [CPTAC data portal](https://cptacdcc.georgetown.edu/cptacPublic) ([Breast](https://cptac-data-portal.georgetown.edu/cptac/s/S015) and [Ovarian](https://cptac-data-portal.georgetown.edu/cptac/s/S020)) to retrieve information of interest regarding the training data.