GSE121655

syn77100298

Created By Aditya Nath aditya.nath

doi: 10.1186/s13059-018-1576-0
title: Linking single-cell measurements of mass, growth rate, and gene expression
funder: NIH-NCI
series:
creator: Prakadan Sanjay Shalek Alex
license: CC-BY 4.0
species: Homo sapiens Mus musculus
studyId: syn9773338
subject:
ageGroup:
citation: Kimmerling RJ et al. (2018). Linking single-cell measurements of mass, growth rate, and gene expression. Genome Biol. 19(1):207. doi: 10.1186/s13059-018-1576-0
dataType: gene expression
keywords:
accessType: Open Access
contributor:
description: We introduce a microfluidic platform that enables single-cell mass and growth rate measurements upstream of single-cell RNA-sequencing (scRNA-seq) to generate paired single-cell biophysical and transcriptional data sets. Biophysical measurements are collected with a serial suspended microchannel resonator platform (sSMR) that utilizes automated fluidic state switching to load individual cells at fixed intervals, achieving a throughput of 120 cells per hour. Each single-cell is subsequently ca...
grantNumber: CA217377
diseaseFocus:
downloadType: Synapse Hosted
alternateName: GSE121655
manifestation:
specimenCount: 762
yearProcessed: 2018
countryOfOrigin:
individualCount: 762
visualizeDataOn:
dataUseModifiers:
conditionsOfAccess: No restriction
measurementTechnique: RNA-seq single-cell RNA-seq
externalRepositoryUri: geo:GSE121655
includedInDataCatalog:

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