GSE116011

syn77100200

Created By Aditya Nath aditya.nath

doi: 10.1186/s13059-018-1607-x
title: An Optically Decodable Bead Array for Linking Imaging and Sequencing with Single-Cell Resolution
funder: NIH-NCI
series:
creator: Yuan Jinzhou Sims Peter
license: CC-BY 4.0
species: Homo sapiens Mus musculus
studyId: syn7315802
subject:
ageGroup:
citation: Yuan J et al. (2018). SCOPE-Seq: a scalable technology for linking live cell imaging and single-cell RNA sequencing. Genome Biol. 19(1):227. doi: 10.1186/s13059-018-1607-x
dataType: gene expression
keywords:
accessType: Open Access
contributor:
description: Optically decodable beads link the identity of an analyte or sample to a measurement through an optical barcode, enabling libraries of biomolecules to be captured on beads in solution and decoded by fluorescence. This approach has been foundational to microarray, sequencing, and flow-based expression profiling technologies. We have combined microfluidics with optically decodable beads to link phenotypic analysis of living cells to sequencing. As a proof-of-concept, we applied this to demonstr...
grantNumber: CA209997
diseaseFocus:
downloadType: Synapse Hosted
alternateName: GSE116011
manifestation:
specimenCount: 11
yearProcessed: 2018
countryOfOrigin:
individualCount: 11
visualizeDataOn:
dataUseModifiers:
conditionsOfAccess: No restriction
measurementTechnique: fluorescence microscopy assay RNA-seq single-cell RNA-seq
externalRepositoryUri: geo:GSE116011
includedInDataCatalog:

GSE116011 page is loading…