GSE115032

syn77086809

Created By Aditya Nath aditya.nath

doi:
title: CLEAR: Coverage-based Limiting-cell Experiment Analysis for RNA-seq (human)
funder: NIH-NCI
series:
creator: Yan P Walker L
license: CC-BY 4.0
species: Homo sapiens
studyId: syn9773346
subject:
ageGroup:
citation:
dataType: gene expression
keywords:
accessType: Open Access
contributor:
description: Direct cDNA preamplification protocols developed for single-cell RNA-seq (scRNA-seq) have enabled transcriptome profiling of rare cells without having to pool multiple samples or to perform RNA extraction. We term this approach limiting-cell RNA-seq (lcRNA-seq). Unlike scRNA-seq, which focuses on ‘cell-atlasing’, lcRNA-seq focuses on identifying differentially expressed genes (DEGs) between experimental groups. This requires accounting for systems noise which can obscure biological difference...
grantNumber: CA217297
diseaseFocus:
downloadType: Synapse Hosted
alternateName: GSE115032
manifestation:
specimenCount: 18
yearProcessed: 2018
countryOfOrigin:
individualCount: 18
visualizeDataOn:
dataUseModifiers:
conditionsOfAccess: No restriction
measurementTechnique: RNA-seq
externalRepositoryUri: geo:GSE115032
includedInDataCatalog:

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