GSE111907

syn77079902

Created By Aditya Nath aditya.nath

doi: 10.1186/s13059-020-02019-x
title: Clinically-relevant cell type cross-talk identified from a lung tumor microenvironment interactome
funder: NIH-NCI
series:
creator: Gentles Andrew
license: CC-BY 4.0
species: Homo sapiens
studyId: syn7315808
subject:
ageGroup:
citation: Gentles AJ et al. (2020). A human lung tumor microenvironment interactome identifies clinically relevant cell-type cross-talk. Genome Biol. 21(1):107. doi: 10.1186/s13059-020-02019-x
dataType: gene expression
keywords:
accessType: Open Access
contributor:
description: Tumors comprise a complex microenvironment of interacting malignant and stromal cell types. Much of our understanding of the tumor microenvironment comes from in vitro studies isolating the interactions between malignant cells and a single stromal cell type, often along a single pathway. To develop a deeper understanding of the interactions between cells within human lung tumors we performed RNA-seq profiling of flow-sorted malignant cells, endothelial cells, immune cells, fibroblasts, and bu...
grantNumber: CA209971
diseaseFocus:
downloadType: Synapse Hosted
alternateName: GSE111907
manifestation:
specimenCount: 185
yearProcessed: 2018
countryOfOrigin:
individualCount: 185
visualizeDataOn:
dataUseModifiers:
conditionsOfAccess: No restriction
measurementTechnique: RNA-seq
externalRepositoryUri: geo:GSE111907
includedInDataCatalog:

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