GSE110061

syn77074454

Created By Aditya Nath aditya.nath

doi:
title: Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution
funder: NIH-NCI
series:
creator: You Qiancheng Cheng Anthony
license: CC-BY 4.0
species: Drosophila melanogaster Homo sapiens Mus musculus
studyId: syn7349742
subject:
ageGroup:
citation:
dataType: chromatin activity
keywords:
accessType: Open Access
contributor:
description: We introduce Chemical-crosslinking Assisted Proximity Capture (CAP-C), a method that utilizes multi-functional chemical crosslinkers with defined physical sizes to directly assess spatial distances between nuclear genomic sequences. CAP-C avoids limitations caused by extensive protein-DNA crosslinking in most in situ methods, and thus generates chromatin contact maps at high resolution with low background noise.
grantNumber: CA193419
diseaseFocus:
downloadType: Synapse Hosted
alternateName: GSE110061
manifestation:
specimenCount: 76
yearProcessed: 2018
countryOfOrigin:
individualCount: 76
visualizeDataOn:
dataUseModifiers:
conditionsOfAccess: No restriction
measurementTechnique: ChIP-seq HI-C whole genome sequencing
externalRepositoryUri: geo:GSE110061
includedInDataCatalog:

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