Load the data directly without downloading

The data files are quite large. Is there a way to load them directly into a Colab notebook without having to download them first?

Created by Abdelrahman Alkahwaji Alkahwaji
Hi Alkahwaji, One option is to read the AnnData in backed mode, subsetting the relevant cells you may want (such as the all of those of a particular subclass or donor), and then pulling that portion of the data into memory for fast operations. https://anndata.readthedocs.io/en/latest/tutorials/notebooks/getting-started.html#partial-reading-of-large-data https://anndata.readthedocs.io/en/latest/generated/anndata.AnnData.to_memory.html Best, Kyle

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The data files are quite large. Is there a way to load them directly into a Colab notebook without having to download them first?

Drop files to upload

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