Here is the error log from my docker submission (submissio id : 9756186). I confirmed that a CSV file is generated under the /output directory when running locally. Could you help me understand how to resolve this? Thank you in advance. ``` STDERR: 2025-07-31T16:44:33.723842761Z 56680f689afd 2025-07-31 16:44:33,723 MainThread INFO cwltool: Resolved '/var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/brats-infra-main/wf-pathology/validation-phase.cwl' to 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/brats-infra-main/wf-pathology/validation-phase.cwl' STDERR: 2025-07-31T16:44:38.393600809Z 56680f689afd 2025-07-31 16:44:38,392 MainThread WARNING cwltool: Workflow checker warning: STDERR: 2025-07-31T16:44:38.393645199Z brats-infra-main/wf-pathology/validation-phase.cwl:63:9: Source 'filepath' of type ["null", STDERR: 2025-07-31T16:44:38.393653809Z "File"] may be incompatible STDERR: 2025-07-31T16:44:38.393660670Z brats-infra-main/wf-pathology/validation-phase.cwl:97:9: with sink 'input_file' of type "File" STDERR: 2025-07-31T16:44:38.393666680Z brats-infra-main/wf-pathology/validation-phase.cwl:63:9: Source 'filepath' of type ["null", STDERR: 2025-07-31T16:44:38.393672100Z "File"] may be incompatible STDERR: 2025-07-31T16:44:38.393677050Z brats-infra-main/wf-pathology/validation-phase.cwl:169:9: with sink 'input_file' of type "File" STDERR: 2025-07-31T16:44:38.774964011Z 56680f689afd 2025-07-31 16:44:38,772 MainThread INFO toil: Running Toil version 4.1.0-5ad5e77d98e1456b4f70f5b00e688a43cdce2ebe. STDERR: 2025-07-31T16:44:39.743430737Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/node-ea89e242-27ad-4a31-af97-dcca1c865155-1cc402dd0e11d5ae18db04a6de87223d/tmp3b4kl5s2/worker_log.txt STDERR: 2025-07-31T16:44:40.123307796Z 56680f689afd 2025-07-31 16:44:40,122 MainThread INFO toil.leader: 0 jobs are running, 0 jobs are issued and waiting to run STDERR: 2025-07-31T16:44:40.125040773Z 56680f689afd 2025-07-31 16:44:40,124 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks-Workflows/cwl-tool-synapseclient/v1.4/cwl/synapse-get-tool.cwl#synapse-get' synapse kind-https_raw.githubusercontent.com_Sage-Bionetworks-Workflows_cwl-tool-synapseclient_v1.4_cwl_synapse-get-tool.cwl_synapse-get/instance-q58yq3w9 with job batch system ID: 1 and cores: 1, disk: 2.0 G, and memory: 100.0 M STDERR: 2025-07-31T16:44:40.125717854Z 56680f689afd 2025-07-31 16:44:40,124 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v4.1/cwl/set_permissions.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v4.1_cwl_set_permissions.cwl/instance-wd_tjh_g with job batch system ID: 2 and cores: 1, disk: 2.0 G, and memory: 100.0 M STDERR: 2025-07-31T16:44:40.126458545Z 56680f689afd 2025-07-31 16:44:40,126 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v4.1/cwl/get_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v4.1_cwl_get_submission.cwl/instance-rtjdy63e with job batch system ID: 3 and cores: 1, disk: 2.0 G, and memory: 100.0 M STDERR: 2025-07-31T16:44:40.128565748Z 56680f689afd 2025-07-31 16:44:40,126 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks-Workflows/cwl-tool-synapseclient/v1.4/cwl/synapse-get-tool.cwl#synapse-get' synapse kind-https_raw.githubusercontent.com_Sage-Bionetworks-Workflows_cwl-tool-synapseclient_v1.4_cwl_synapse-get-tool.cwl_synapse-get/instance-84cylvkx with job batch system ID: 4 and cores: 1, disk: 2.0 G, and memory: 100.0 M STDERR: 2025-07-31T16:44:41.099693086Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/node-ea89e242-27ad-4a31-af97-dcca1c865155-1cc402dd0e11d5ae18db04a6de87223d/tmphgszd2fu/worker_log.txt STDERR: 2025-07-31T16:44:41.133630873Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/node-ea89e242-27ad-4a31-af97-dcca1c865155-1cc402dd0e11d5ae18db04a6de87223d/tmpgd2722mv/worker_log.txt STDERR: 2025-07-31T16:44:41.134070109Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/node-ea89e242-27ad-4a31-af97-dcca1c865155-1cc402dd0e11d5ae18db04a6de87223d/tmpdojcoulw/worker_log.txt STDERR: 2025-07-31T16:44:41.175963319Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/node-ea89e242-27ad-4a31-af97-dcca1c865155-1cc402dd0e11d5ae18db04a6de87223d/tmpmwcrjn6j/worker_log.txt STDERR: 2025-07-31T16:44:44.383733389Z 56680f689afd 2025-07-31 16:44:44,382 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks-Workflows/cwl-tool-synapseclient/v1.4/cwl/synapse-get-tool.cwl#synapse-get' synapse kind-https_raw.githubusercontent.com_Sage-Bionetworks-Workflows_cwl-tool-synapseclient_v1.4_cwl_synapse-get-tool.cwl_synapse-get/instance-q58yq3w9 STDERR: 2025-07-31T16:44:44.547515478Z 56680f689afd 2025-07-31 16:44:44,547 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks-Workflows/cwl-tool-synapseclient/v1.4/cwl/synapse-get-tool.cwl#synapse-get' synapse kind-https_raw.githubusercontent.com_Sage-Bionetworks-Workflows_cwl-tool-synapseclient_v1.4_cwl_synapse-get-tool.cwl_synapse-get/instance-84cylvkx STDERR: 2025-07-31T16:44:45.468638018Z 56680f689afd 2025-07-31 16:44:45,467 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v4.1/cwl/get_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v4.1_cwl_get_submission.cwl/instance-rtjdy63e STDERR: 2025-07-31T16:44:45.468875602Z 56680f689afd 2025-07-31 16:44:45,468 MainThread INFO toil.leader: Issued job 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/brats-infra-main/wf-pathology/steps/validate.cwl' validate.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_50593b5c-0553-4eee-911d-80e48b7bacaa_brats-infra-main_wf-pathology_steps_validate.cwl/instance-du6c4aug with job batch system ID: 5 and cores: 1, disk: 2.0 G, and memory: 100.0 M STDERR: 2025-07-31T16:44:45.515184669Z 56680f689afd 2025-07-31 16:44:45,514 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v4.1/cwl/set_permissions.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v4.1_cwl_set_permissions.cwl/instance-wd_tjh_g STDERR: 2025-07-31T16:44:46.402785082Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/node-ea89e242-27ad-4a31-af97-dcca1c865155-1cc402dd0e11d5ae18db04a6de87223d/tmpnmfuh21y/worker_log.txt STDERR: 2025-07-31T16:44:46.603940121Z 56680f689afd 2025-07-31 16:44:46,602 MainThread INFO toil.leader: Job ended: 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/brats-infra-main/wf-pathology/steps/validate.cwl' validate.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_50593b5c-0553-4eee-911d-80e48b7bacaa_brats-infra-main_wf-pathology_steps_validate.cwl/instance-du6c4aug STDERR: 2025-07-31T16:44:46.603999402Z 56680f689afd 2025-07-31 16:44:46,603 MainThread WARNING toil.leader: The job seems to have left a log file, indicating failure: 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/brats-infra-main/wf-pathology/steps/validate.cwl' validate.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_50593b5c-0553-4eee-911d-80e48b7bacaa_brats-infra-main_wf-pathology_steps_validate.cwl/instance-du6c4aug STDERR: 2025-07-31T16:44:46.604204365Z 56680f689afd 2025-07-31 16:44:46,603 MainThread WARNING toil.leader: Log from job kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_50593b5c-0553-4eee-911d-80e48b7bacaa_brats-infra-main_wf-pathology_steps_validate.cwl/instance-du6c4aug follows: STDERR: 2025-07-31T16:44:46.604216556Z =========> STDERR: 2025-07-31T16:44:46.604222926Z INFO:toil.worker:---TOIL WORKER OUTPUT LOG--- STDERR: 2025-07-31T16:44:46.604230336Z INFO:toil:Running Toil version 4.1.0-5ad5e77d98e1456b4f70f5b00e688a43cdce2ebe. STDERR: 2025-07-31T16:44:46.604237146Z Traceback (most recent call last): STDERR: 2025-07-31T16:44:46.604244066Z File "/usr/local/lib/python3.8/site-packages/cwltool/process.py", line 454, in fill_in_defaults STDERR: 2025-07-31T16:44:46.604250756Z raise WorkflowException( STDERR: 2025-07-31T16:44:46.604256276Z cwltool.errors.WorkflowException: Missing required input parameter 'input_file' STDERR: 2025-07-31T16:44:46.604262016Z STDERR: 2025-07-31T16:44:46.604266846Z The above exception was the direct cause of the following exception: STDERR: 2025-07-31T16:44:46.604272807Z STDERR: 2025-07-31T16:44:46.604277727Z Traceback (most recent call last): STDERR: 2025-07-31T16:44:46.604282737Z File "/usr/local/lib/python3.8/site-packages/toil/worker.py", line 366, in workerScript STDERR: 2025-07-31T16:44:46.604288577Z job._runner(jobGraph=jobGraph, jobStore=jobStore, fileStore=fileStore, defer=defer) STDERR: 2025-07-31T16:44:46.604293847Z File "/usr/local/lib/python3.8/site-packages/toil/job.py", line 1392, in _runner STDERR: 2025-07-31T16:44:46.604299317Z returnValues = self._run(jobGraph, fileStore) STDERR: 2025-07-31T16:44:46.604304557Z File "/usr/local/lib/python3.8/site-packages/toil/job.py", line 1329, in _run STDERR: 2025-07-31T16:44:46.604309947Z return self.run(fileStore) STDERR: 2025-07-31T16:44:46.604315397Z File "/usr/local/lib/python3.8/site-packages/toil/cwl/cwltoil.py", line 880, in run STDERR: 2025-07-31T16:44:46.604321427Z fill_in_defaults( STDERR: 2025-07-31T16:44:46.604326287Z File "/usr/local/lib/python3.8/site-packages/cwltool/process.py", line 454, in fill_in_defaults STDERR: 2025-07-31T16:44:46.604334228Z raise WorkflowException( STDERR: 2025-07-31T16:44:46.604339228Z File "/usr/local/lib/python3.8/site-packages/schema_salad/sourceline.py", line 305, in __exit__ STDERR: 2025-07-31T16:44:46.604344458Z raise self.makeError(str(exc_value)) from exc_value STDERR: 2025-07-31T16:44:46.604357168Z cwltool.errors.WorkflowException: brats-infra-main/wf-pathology/steps/validate.cwl:10:3: Missing required input parameter 'input_file' STDERR: 2025-07-31T16:44:46.604363188Z ERROR:toil.worker:Exiting the worker because of a failed job on host 56680f689afd STDERR: 2025-07-31T16:44:46.604372018Z WARNING:toil.jobGraph:Due to failure we are reducing the remaining retry count of job 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/brats-infra-main/wf-pathology/steps/validate.cwl' validate.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_50593b5c-0553-4eee-911d-80e48b7bacaa_brats-infra-main_wf-pathology_steps_validate.cwl/instance-du6c4aug with ID kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_50593b5c-0553-4eee-911d-80e48b7bacaa_brats-infra-main_wf-pathology_steps_validate.cwl/instance-du6c4aug to 0 STDERR: 2025-07-31T16:44:46.604379418Z <========= STDERR: 2025-07-31T16:44:46.605150300Z 56680f689afd 2025-07-31 16:44:46,604 MainThread WARNING toil.leader: Job 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/brats-infra-main/wf-pathology/steps/validate.cwl' validate.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_50593b5c-0553-4eee-911d-80e48b7bacaa_brats-infra-main_wf-pathology_steps_validate.cwl/instance-du6c4aug with ID kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_50593b5c-0553-4eee-911d-80e48b7bacaa_brats-infra-main_wf-pathology_steps_validate.cwl/instance-du6c4aug is completely failed STDERR: 2025-07-31T16:44:53.842485555Z 56680f689afd 2025-07-31 16:44:53,840 MainThread INFO toil.leader: Finished toil run with 5 failed jobs. STDERR: 2025-07-31T16:44:53.842520826Z 56680f689afd 2025-07-31 16:44:53,840 MainThread INFO toil.leader: Failed jobs at end of the run: 'https://raw.githubusercontent.com/Sage-Bionetworks-Workflows/cwl-tool-synapseclient/v1.4/cwl/synapse-get-tool.cwl#synapse-get' synapse kind-https_raw.githubusercontent.com_Sage-Bionetworks-Workflows_cwl-tool-synapseclient_v1.4_cwl_synapse-get-tool.cwl_synapse-get/instance-q58yq3w9 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/brats-infra-main/wf-pathology/steps/validate.cwl' validate.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_50593b5c-0553-4eee-911d-80e48b7bacaa_brats-infra-main_wf-pathology_steps_validate.cwl/instance-du6c4aug 'https://raw.githubusercontent.com/Sage-Bionetworks-Workflows/cwl-tool-synapseclient/v1.4/cwl/synapse-get-tool.cwl#synapse-get' synapse kind-https_raw.githubusercontent.com_Sage-Bionetworks-Workflows_cwl-tool-synapseclient_v1.4_cwl_synapse-get-tool.cwl_synapse-get/instance-84cylvkx 'CWLWorkflow' kind-CWLWorkflow/instance-cx_lo8sx 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v4.1/cwl/get_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v4.1_cwl_get_submission.cwl/instance-rtjdy63e STDERR: 2025-07-31T16:44:53.856463724Z Traceback (most recent call last): STDERR: 2025-07-31T16:44:53.856496335Z File "/usr/local/bin/toil-cwl-runner", line 8, in STDERR: 2025-07-31T16:44:53.856502495Z sys.exit(main()) STDERR: 2025-07-31T16:44:53.856507285Z File "/usr/local/lib/python3.8/site-packages/toil/cwl/cwltoil.py", line 1691, in main STDERR: 2025-07-31T16:44:53.856512145Z outobj = toil.start(wf1) STDERR: 2025-07-31T16:44:53.856516755Z File "/usr/local/lib/python3.8/site-packages/toil/common.py", line 829, in start STDERR: 2025-07-31T16:44:53.856530995Z return self._runMainLoop(rootJobGraph) STDERR: 2025-07-31T16:44:53.856535665Z File "/usr/local/lib/python3.8/site-packages/toil/common.py", line 1115, in _runMainLoop STDERR: 2025-07-31T16:44:53.856540115Z return Leader(config=self.config, STDERR: 2025-07-31T16:44:53.856544365Z File "/usr/local/lib/python3.8/site-packages/toil/leader.py", line 269, in run STDERR: 2025-07-31T16:44:53.856548815Z raise FailedJobsException(self.config.jobStore, self.toilState.totalFailedJobs, self.jobStore) STDERR: 2025-07-31T16:44:53.856555105Z toil.leader.FailedJobsException: The job store 'file:/var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/tmp9xbgbv18' contains 5 failed jobs: 'https://raw.githubusercontent.com/Sage-Bionetworks-Workflows/cwl-tool-synapseclient/v1.4/cwl/synapse-get-tool.cwl#synapse-get' synapse kind-https_raw.githubusercontent.com_Sage-Bionetworks-Workflows_cwl-tool-synapseclient_v1.4_cwl_synapse-get-tool.cwl_synapse-get/instance-q58yq3w9, 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/brats-infra-main/wf-pathology/steps/validate.cwl' validate.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_50593b5c-0553-4eee-911d-80e48b7bacaa_brats-infra-main_wf-pathology_steps_validate.cwl/instance-du6c4aug, 'https://raw.githubusercontent.com/Sage-Bionetworks-Workflows/cwl-tool-synapseclient/v1.4/cwl/synapse-get-tool.cwl#synapse-get' synapse kind-https_raw.githubusercontent.com_Sage-Bionetworks-Workflows_cwl-tool-synapseclient_v1.4_cwl_synapse-get-tool.cwl_synapse-get/instance-84cylvkx, 'CWLWorkflow' kind-CWLWorkflow/instance-cx_lo8sx, 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v4.1/cwl/get_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v4.1_cwl_get_submission.cwl/instance-rtjdy63e STDERR: 2025-07-31T16:44:53.856630977Z Log from job 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/brats-infra-main/wf-pathology/steps/validate.cwl' validate.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_50593b5c-0553-4eee-911d-80e48b7bacaa_brats-infra-main_wf-pathology_steps_validate.cwl/instance-du6c4aug follows: STDERR: 2025-07-31T16:44:53.856641857Z =========> STDERR: 2025-07-31T16:44:53.856647207Z INFO:toil.worker:---TOIL WORKER OUTPUT LOG--- STDERR: 2025-07-31T16:44:53.856880081Z INFO:toil:Running Toil version 4.1.0-5ad5e77d98e1456b4f70f5b00e688a43cdce2ebe. STDERR: 2025-07-31T16:44:53.856888571Z Traceback (most recent call last): STDERR: 2025-07-31T16:44:53.856892961Z File "/usr/local/lib/python3.8/site-packages/cwltool/process.py", line 454, in fill_in_defaults STDERR: 2025-07-31T16:44:53.856897821Z raise WorkflowException( STDERR: 2025-07-31T16:44:53.856902031Z cwltool.errors.WorkflowException: Missing required input parameter 'input_file' STDERR: 2025-07-31T16:44:53.856906281Z STDERR: 2025-07-31T16:44:53.856911661Z The above exception was the direct cause of the following exception: STDERR: 2025-07-31T16:44:53.856917001Z STDERR: 2025-07-31T16:44:53.856921151Z Traceback (most recent call last): STDERR: 2025-07-31T16:44:53.856925341Z File "/usr/local/lib/python3.8/site-packages/toil/worker.py", line 366, in workerScript STDERR: 2025-07-31T16:44:53.856936931Z job._runner(jobGraph=jobGraph, jobStore=jobStore, fileStore=fileStore, defer=defer) STDERR: 2025-07-31T16:44:53.856941462Z File "/usr/local/lib/python3.8/site-packages/toil/job.py", line 1392, in _runner STDERR: 2025-07-31T16:44:53.856945842Z returnValues = self._run(jobGraph, fileStore) STDERR: 2025-07-31T16:44:53.856950022Z File "/usr/local/lib/python3.8/site-packages/toil/job.py", line 1329, in _run STDERR: 2025-07-31T16:44:53.856954402Z return self.run(fileStore) STDERR: 2025-07-31T16:44:53.856958572Z File "/usr/local/lib/python3.8/site-packages/toil/cwl/cwltoil.py", line 880, in run STDERR: 2025-07-31T16:44:53.856962872Z fill_in_defaults( STDERR: 2025-07-31T16:44:53.856967002Z File "/usr/local/lib/python3.8/site-packages/cwltool/process.py", line 454, in fill_in_defaults STDERR: 2025-07-31T16:44:53.856971282Z raise WorkflowException( STDERR: 2025-07-31T16:44:53.856975382Z File "/usr/local/lib/python3.8/site-packages/schema_salad/sourceline.py", line 305, in __exit__ STDERR: 2025-07-31T16:44:53.856979762Z raise self.makeError(str(exc_value)) from exc_value STDERR: 2025-07-31T16:44:53.856983932Z cwltool.errors.WorkflowException: brats-infra-main/wf-pathology/steps/validate.cwl:10:3: Missing required input parameter 'input_file' STDERR: 2025-07-31T16:44:53.856988312Z ERROR:toil.worker:Exiting the worker because of a failed job on host 56680f689afd STDERR: 2025-07-31T16:44:53.856993982Z WARNING:toil.jobGraph:Due to failure we are reducing the remaining retry count of job 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/50593b5c-0553-4eee-911d-80e48b7bacaa/brats-infra-main/wf-pathology/steps/validate.cwl' validate.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_50593b5c-0553-4eee-911d-80e48b7bacaa_brats-infra-main_wf-pathology_steps_validate.cwl/instance-du6c4aug with ID kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_50593b5c-0553-4eee-911d-80e48b7bacaa_brats-infra-main_wf-pathology_steps_validate.cwl/instance-du6c4aug to 0 STDERR: 2025-07-31T16:44:53.856999412Z <========= ```