EGAD00001008608 RNA-Seq Processed Data - quant.sf (requires approval on EGA)

syn58895011

Data hosted and governed on Synapse.org and Knowledge Portals by Sage Bionetworks.
Created By Robert Allaway allawayr

title: Genomic landscape of MPNST (GeM Consortium) - Processed RNA-Seq Transcript Quantification (Salmon)
funder: Other
creator: Robert Allaway
hosting: external-access
license: CC-BY 4.0
species: Homo sapiens
studyId: syn32128792
subject: Neurofibromatosis
dataType: gene expression
keywords: MPNST Malignant Peripheral Nerve Sheath Tumor NF1 Neurofibromatosis type 1 Transcriptomics RNA-Seq Processed Data Transcript Expression Quantification EGA Genomics
accessType: Controlled Access
repository: EGA
contributor: NFRI - Genomics of MPNST (GeM) Consortium Boston Children's Hospital
description: Processed transcript-level quantification data (Salmon format) from RNA sequencing of Malignant Peripheral Nerve Sheath Tumor (MPNST) samples, primarily from individuals with NF1. Data requires approval and access via EGA (EGAD00001008608).
externalUrl: https://ega-archive.org/datasets/EGAD00001008608
diseaseFocus: Neurofibromatosis type 1
alternateName: EGAD00001008608 RNA-Seq Processed Data - quant.sf (requires approval on EGA)
manifestation: Malignant Peripheral Nerve Sheath Tumor
specimenCount: 139
yearProcessed: 2024
individualCount: 79
dataUseModifiers: DUO:0000042
conditionsOfAccess: Data is stored in EGA (EGAD00001008608) and requires application and approval via EGA for access. Data is not available directly via Synapse.
measurementTechnique: RNA-seq
croissant_file_s3_object: https://synapse-croissant-metadata.s3.us-east-1.amazonaws.com/EGAD00001008608+RNA-Seq+Processed+Data+-+quant.sf+%28requires+approval+on+EGA%29_syn58895011.2_datasetCollection_syn50913342_croissant.jsonld

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