Hi,
The sample names in the different data types in the ROSMAP study do not match each other.
Here are 4 example sample names from methylation data:
TBI-AUTO73325-PT-3149
PT-BZHL PT-BZCH PT-BY9H TBI-AUTO73307-PT-314I
TBI-AUTO73043-PT-35BD
PT-BZI5
And here are examples from miRNA data:
DLPFC_115_1A
DLPFC_118_1A
DLPFC_131_1A
DLPFC_137_1A
And below are from RNA-Seq data:
525_120515_0
383_120503_0
93_120417_0
610_120523_0
I have no clue about methylation sample names' mapping to others. My guess for miRNA and RNA-Seq pair is that middle number "_x_" in miRNA sample names correspond to the initial number "x_" in RNA-Seq, but I am not sure if this is true. Where can I find a matching between all those different naming conventions? Thanks!
Created by safiye celik safiye Thank you, Mette, this is very helpful. Please see the ID mapping key here: https://www.synapse.org/#!Synapse:syn3382527