Hello
Using only the "Target"/"TargetName" fields in the file somamer.mapping.csv, I cannot map the entries to unique UniProt IDs. For example, the target "14-3-3" is linked to several files, therefore several "SomamerID" values and supposedly several UniProt IDs. Thus, it seems like I would need a mapping between Somamer IDs and UniProt IDs. However, I cannot find such a mapping anywhere. Could you maybe include it in the file (i.e., include a "UniProtID" column) ?
Thanks a lot
Created by Guillaume Joyet gjoyet Hi Maik,
Thanks a lot for your quick response. I will discuss with my supervisor and would DM you if needed.
Cheers,
Guillaume Hi Guillaume,
Unfortunately, there is no easy solution to this. SomaLogic has multiple aptamers with the same target, but the UniProt ID stays the same. It depends on your downstream applications. Please feel free to DM me for any additional information.
Best,
Maik