Hi, i) I want to ask which genome build version you used for the GWAS: hg38 or hg19? I saw in another thread, you mentioned the genome reference for the meta data is from hg38, so I assume this is the same case for the GWAS summary data. ii) I want to convert the column "ID" to SNPID. Can you please let me know which version of dbsnp I should use for this purpose? Does dbSNP_151_hg38 work? Thanks

Created by Junhao Wen anbai106
You can use the SNP RSID maps in the respective subfolder in the Metadata folder for conversion to rs identifiers. Any other version of dbSNP should work as well.

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