broad.mit.edu_OV_HT_HG-U133A.whitelist_tumor

Created By Kyle Ellrott kellrott
BROAD TCGA ALGORITHM DESCRIPTION Probeset-level Robust Multiarray Analysis Protocol Name: broad.mit.edu:probeset_rma:HT_HG-U133A:01 Link: http://www.broad.mit.edu/cancer/software/genepattern/ Data Level: 2 Data File: *.level2.txt, *.level2.data.txt Probeset-level RMA Gene-level Robust Multiarray Analysis Protocol Name: broad.mit.edu:gene_rma:HT_HG-U133A:01 Link: http://www.broad.mit.edu/cancer/software/genepattern/ Data Level: 3 Data File: *.level3.txt, *.level3.data.txt Gene-level RMA Region of Interest Protocol Name: broad.mit.edu:regions_of_interest_cna:HT_HG-U133A:01 Link: http://www.broad.mit.edu/cancer/software/genepattern/ Data Level: 4 Data File: *.ROI We apply the GISTIC algorithm.

freeze: tcga_pancancer_v4
acronym: OV
disease: cancer
species: Homo sapiens
fileType: genomicMatrix
platform: HT_HG-U133A
whitelist: pancan12-whitelist-2012_12_18.whitelist
dataCenter: broad.mit.edu
lastUpdate: 2012-10-04
tissueType: cell line control
dataSubType: geneExp
lastUpdated: 2012-10-04
sampleSetType: tumor