Seurat Object

Thank you for giving me access to this data. However, I wanted to ask if there is any Seurat object available for us to directly analyze the data. I see that there are RDS files for different cell types, but they all appear to be large lists rather than Seurat objects.

Created by Achira Shah AchiraS
Hi @AchiraS, I am a data manager supporting the ARK Portal. According to our file annotations there are 11 SeuratObject saved to Rds files. These files can be selected using the 'fileFormat' and 'RObjectClass' filter options on the portal [All Data](https://arkportal.synapse.org/Explore/All%20Data) exploration page and setting these filters to 'Rds' and 'SeuratObj' respectively. Additionally, most single cell experiments have the gene counts, formatted as a spare matrix saved to an Rds file along with an accompanying cell metadata data.frame, written to a separate Rds file, that can be use to create SeuratObjects using the [CreateSeuratObject](https://satijalab.github.io/seurat-object/reference/CreateSeuratObject.html) function.

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Thank you for giving me access to this data. However, I wanted to ask if there is any Seurat object available for us to directly analyze the data. I see that there are RDS files for different cell types, but they all appear to be large lists rather than Seurat objects.

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