I am trying to map the sample ID in the per chromosome files related to the joint analysis of WGS ( for example "NIA_JG_1898_samples_GRM_WGS_b37_JointAnalysis01_2017-12-08_2.recalibrated_variants.Broad_Rush.vcf.gz"). I wish to know the metadata for this sample such as whether the individual was diagnosed as AD or not. I am unable to find the corresponding metadata file. Can you please help?
Created by rrajesh Thanks for the prompt response. Let me check if I am able link the specimen IDs to file! Hi there,
If you go to the [WGS Harmonization Study](https://adknowledgeportal.synapse.org/Explore/Studies/DetailsPage?Study=syn22264775) page in the AD Knowledge Portal, click on the "Study Data" tab, and scroll down, you will see a table called "Metadata Files" listing all the metadata files associated with this study. These can be used to link specimenIDs to clinical metadata such as neuropathology scores and diagnosis. Let me know if that answers your question!
Best,
Abby