I am going to re-map the reads from *.unmapped.fq file with new version genome. But I found the the *unmapped.fq file is a binary format in the linux system. Does anyone know how to deal with this problem.
Thanks
huangcy
Created by chenyu huang huangchenyu Hi Mette, all the unmapped.fq files have this problem. these unmapped.fq files from synIDs such as syn4055343, syn4055345, syn4055348 and so on. But the issue of unmapped.fq file format has been resolved. The *unmapped.fq file format should be renamed as *unmapped.fq.gz.
Thanks
huangcy Can you please post the synID of the data that you are referring to