Hi,
Thank you so much for these wonderful resources. A previous question (threadID=3218) has asked whether MSBB_Proteomics_PFC_proteininput (syn9637145) has been log2 normalized, batch corrected with ComBat, quantile normalized, with the regression adapted to PMI, sex, AOD (as described in MSBB_Proteomics_PFC_networkRcode (syn9637144)). At the time, @ductyler and @minghui.wang were linked, and far as I can tell Duc confirmed that the file had already been normalized. Can I get a confirmation that this is accurate since based on my analysis I do not think this is accurate for this file (boxplot medians varied, NAs not removed, not log2, etc).
Thank you so much for your time.
Created by Skoren Hello, has there been any update on this? Thanks for your time. I am also having the same issue when plotting the data and would appreciate any guidance on how to handle this problem. Thank you. Bump.
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