Greetings, I am hoping to work with the MSBB Proteomics data. I'm hoping that there is a file that I can use in the same way one might use a gene expression matrix for analysis (genes * subjects). It appears, based on the MSBB_Proteomics_PFC_networkRcode (syn9637144), that the data in MSBB_Proteomics_PFC_proteininput (syn9637145) file are the subject-level protein measurements that have been log2 normalized, batch corrected with ComBat, quantile normalized, and had the NAs removed. Is this is the case? If so--is it reasonable to use this file as an input for subject-level protein expression analysis? Thanks, Kelly