Hello.
When I do fastqc or cutadapt on this syn33073353 fastq data, it contains strange sequences and causes errors.
Also, when I try to compress the file with gzip, it does not work.
Could you please check this or re-upload this data?
Best,
Misato
Created by Misato Kaishima K-Misato Hi @K-Misato ,
From our end, the file is fine and gzip worked without any problems (it does take a long time to run). It is a very large file, we are wondering if your system may be timing out before processing is complete. Are you able to process other smaller fastq files?
You can check the size of a file in bytes using the following command:
```
ls -l
```
This fastq should be 31982734430 bytes in the uncompressed file.
Best,
Laura