Hi there,
I am wondering if there are more raw data available for the RNAseq data in The Fresh Microglia Regulome (FreshMicro) Study (syn25671134).
In the processed data syn25671149, there are 127 samples available (also in the publication). But in the raw data (syn25671148), there are only data for 108 samples. Is there a way to obtain the data for the remaining samples?
Thanks,
Qi
Created by Qi Wang qwang178 Hello Qi.
Glad to have you using the data! The reason we have provided the raw data for only 108 out of the 127 sample is the IRB permissions for the missing biopsy samples which do not allow broad distribution of the data outside of defined projects/collaborations. The 108 samples with the available data are from autopsies, so no IRB issues there. We updated the IRB for the biopsies so the future samples will have broader permissions including the broader distribution. At this moment, if you need to have access to the raw data for these biopsy samples you may have to go through some form of a collaboration with Panos Roussos.
Cheers, Roman Hi Qi,
This data was contributed by Roman Kosoy at MSBB (@romanko), who may be able to answer your question about the discrepancy in sample sizes and availability of additional data.
Best,
Jessica
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