2-055_pdx.TGCGGCGTAT-ACCCTCGGTA.HM3CHDSXY_TGCGGCGTAT-ACCCTCGGTA_L004_R2.fastq.gz
syn25176243
Created By
Kuangying Yang kuangyingyang
sex: Female
Uuid: 29815f7d-4f08-4470-8a1d-7504863299d6
organ:
tissue: PDX tissue
ageUnit:
runType: pairedEnd
species: Homo sapiens
studyId: syn21984813
comments:
dataType: geneExpression
entityId: syn25176243
readPair: 150
Component: RNASeqTemplate
aliquotID:
diagnosis: Neurofibromatosis type 1
readDepth:
studyName: Predictive Modeling Utilizing a Preclinical NF1-MPNST Platform Suitable for Precision Oncology
consortium: NFRI
fileFormat: fastq
initiative: MPNST Patient-Derived Model Centers
isCellLine: No
isStranded: Yes
readLength: 151
specimenID: 2-055_pdx
dataSubtype: raw
isXenograft: TRUE
libraryPrep: rRNAdepletion
nf1Genotype: -/-
nf2Genotype: +/+
targetDepth:
individualID: JH-2-055
resourceType: experimentalData
fundingAgency: NFRI,NIH-NCI
isPrimaryCell: No
isMultiSpecimen: No
parentSpecimenID: JH-2-055_MPNST_PDX
readStrandOrigin: Reverse
isMultiIndividual: No
nucleicAcidSource: bulk cell
dissociationMethod: none
readPairOrientation:
experimentalCondition: pdx
specimenPreparationMethod: Flash frozen
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